HIV Target gene Detail Information

> RPGRIP1L Gene Search Result

Gene Information

Gene Name	RPGRIP1L
Gene ID	23322
Gene Full Name	RPGRIP1 like
Gene Alias	FTM; MKS5; CORS3; JBTS7; NPHP8; PPP1R134
Transcripts	ENSG00000103494
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	Q68CZ1
HGNC ID	HGNC:29168
VEGA ID	OTTHUMG00000173125
OMIM ID	610937
String ID	9606.ENSP00000369257
PharmGKB ID	PA162401983

Target gene [RPGRIP1L] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4016721	chr16				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RPGRIP1L expression and immune infiltrating cell level correlation result in HIV+ samples
RPGRIP1L expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).