HBV Target gene Detail Information

> RP1 Gene Search Result

Gene Information

Gene Name	RP1
Gene ID	6101
Gene Alias	ORP1; DCDC4A
Transcripts	ENSG00000104237
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins
Uniport_ID	P56715
HGNC ID	HGNC:10263
VEGA ID	OTTHUMG00000164379
OMIM ID	603937
String ID	9606.ENSP00000220676
PharmGKB ID	PA34635

Target gene [RP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1003271	chr13	41	91	18	150	View
1003272	chr13	42	91	17	150	View
1005059	chr6	27	35		62	View
1006742	chr8	30	3	1	34	View
1014277	chr13	2	2		4	View
1015829	chr5	2			2	View
1017533	chrX				0	View
1400139	chr12	9	3		12	View
1402171	chr8	30	3	1	34	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RP1 expression and immune infiltrating cell level correlation result in HBV+ samples
RP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).