HBV Target gene Detail Information

> ROCK1 Gene Search Result


Gene Information
Gene Name ROCK1
Gene ID 6093
Gene Full Name Rho associated coiled-coil containing protein kinase 1
Gene Alias ROCK-I; P160ROCK
Transcripts ENSG00000067900
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Enzymes, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins
Gene Function Oncogene
Uniport_ID Q13464
HGNC ID HGNC:10251
VEGA ID OTTHUMG00000131723
OMIM ID 601702
String ID 9606.ENSP00000382697
Drugbank ID BE0001016
Drug (Cytoscape Annotation) Ruxolitinib Phosphate;Bosutinib;Sunitinib Malate
PharmGKB ID PA34623
Target gene [ROCK1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000502 chr18 810 1064 191 2065 View
1000522 chr18 797 1028 185 2010 View
1004296 chr18 83 3 86 View
1004328 chr18 82 3 85 View
1010106 chr18 7 6 13 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of ROCK1 expression and immune infiltrating cell level correlation result in HBV+ samples
ROCK1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).