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HTLV1 Target gene Detail Information

> ROBO2 Gene Search Result


Gene Information
Gene Name ROBO2
Gene ID 6092
Gene Full Name roundabout guidance receptor 2
Gene Alias SAX3
Transcripts ENSG00000185008
Virus HTLV1
Gene Type protein coding
HPA Location Info Centriolar satellite;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9HCK4
HGNC ID HGNC:10250
VEGA ID OTTHUMG00000158935
OMIM ID 602431
String ID 9606.ENSP00000417335
PharmGKB ID PA34621
Target gene [ROBO2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005792 chr3 3 22 55 80 View
6005857 chr3 16 45 18 79 View
6010530 chr3 27 3 30 View
6016443 chr3 10 1 1 12 View
6016991 chr3 4 5 2 11 View
6017761 chr3 10 10 View
6018118 chr3 6 2 8 View
6019274 chr3 4 1 3 8 View
6019421 chr3 4 4 8 View
6019595 chr3 6 2 8 View
6019709 chr3 5 2 7 View
6022490 chr3 1 3 1 5 View
6024520 chr3 3 3 View
6026470 chr3 2 2 View
6026967 chr3 2 2 View
6027285 chr3 2 2 View
6028100 chr3 1 1 View
6028562 chr3 1 1 View
6029110 chr3 1 1 View
6029300 chr3 1 1 View
6029301 chr3 1 1 View
6029302 chr3 1 1 View
6030560 chr3 0 View
6030790 chr3 0 View
6030949 chr3 0 View
6031291 chr3 0 View
6031566 chr3 0 View
6031591 chr3 0 View
6033102 chr3 0 View
6033306 chr3 0 View
6033366 chr3 0 View
6033404 chr3 0 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).