HPV Target gene Detail Information

> RNU5E-1 Gene Search Result


Gene Information
Gene Name RNU5E-1
Gene ID 26829
Gene Full Name RNA, U5E small nuclear 1
Gene Alias U5E; RNU5E
Transcripts ENSG00000199347
Virus HPV
Gene Type snRNA
HPA Location Info
HGNC ID HGNC:10215
PharmGKB ID PA34582
Target gene [RNU5E-1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5403221 chr5 9 20 10 39 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).