HBV Target gene Detail Information

> RNPS1 Gene Search Result

Gene Information

Gene Name	RNPS1
Gene ID	10921
Gene Full Name	RNA binding protein with serine rich domain 1
Gene Alias	E5.1
Transcripts	ENSG00000205937
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins, Transporters
Uniport_ID	Q15287
HGNC ID	HGNC:10080
VEGA ID	OTTHUMG00000128828
OMIM ID	606447
String ID	9606.ENSP00000457723
PharmGKB ID	PA34453

Target gene [RNPS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1000069	chr16	3561	2967	1760	8288	View
1402812	chr16	3561	2967	1760	8288	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RNPS1 expression and immune infiltrating cell level correlation result in HBV+ samples
RNPS1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).