HIV Target gene Detail Information

> RNGTT Gene Search Result

Gene Information

Gene Name	RNGTT
Gene ID	8732
Gene Full Name	RNA guanylyltransferase and 5'-phosphatase
Gene Alias	HCE; HCE1; hCAP; CAP1A
Transcripts	ENSG00000111880
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	O60942
HGNC ID	HGNC:10073
VEGA ID	OTTHUMG00000015190
OMIM ID	603512
String ID	9606.ENSP00000358497
PharmGKB ID	PA34446

Target gene [RNGTT] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005401	chr6	29	4		33	View
4012771	chr6	3	1		4	View
4014782	chr6	2			2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RNGTT expression and immune infiltrating cell level correlation result in HIV+ samples
RNGTT expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RNGTT expression and immune infiltrating cell level correlation result in HIV+ samples
RNGTT expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).