HBV Target gene Detail Information

> RNF220 Gene Search Result

Gene Information

Gene Name	RNF220
Gene ID	55182
Gene Full Name	ring finger protein 220
Gene Alias	C1orf164
Transcripts	ENSG00000187147
Virus	HBV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q5VTB9
HGNC ID	HGNC:25552
VEGA ID	OTTHUMG00000007697
OMIM ID	616136
String ID	9606.ENSP00000347548
PharmGKB ID	PA162401886

Target gene [RNF220] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1011252	chr1	8	1		9	View
1402164	chr1	8	1		9	View
1404606	chr1	52	27	2	81	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RNF220 expression and immune infiltrating cell level correlation result in HBV+ samples
RNF220 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).