HIV Target gene Detail Information

> RNF19A Gene Search Result


Gene Information
Gene Name RNF19A
Gene ID 25897
Gene Full Name ring finger protein 19A, RBR E3 ubiquitin protein ligase
Gene Alias RNF19
Transcripts ENSG00000034677
Virus HIV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NV58
HGNC ID HGNC:13432
VEGA ID OTTHUMG00000164707
OMIM ID 607119
String ID 9606.ENSP00000428968
PharmGKB ID PA162401601
Target gene [RNF19A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003053 chr8 12 36 23 71 View
4004902 chr8 19 15 4 38 View
4005464 chr8 29 3 32 View
4006271 chr8 26 26 View
4006285 chr8 13 13 26 View
4007698 chr8 13 4 1 18 View
4010450 chr8 5 2 2 9 View
4015150 chr8 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).