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HIV Target gene Detail Information

> RNF157 Gene Search Result


Gene Information
Gene Name RNF157
Gene ID 114804
Gene Full Name ring finger protein 157
Transcripts ENSG00000141576
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Vesicles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q96PX1
HGNC ID HGNC:29402
VEGA ID OTTHUMG00000132627
String ID 9606.ENSP00000269391
PharmGKB ID PA134974884
Target gene [RNF157] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001725 chr17 135 1 136 View
4002029 chr17 27 82 7 116 View
4002203 chr17 20 80 6 106 View
4002358 chr17 62 2 34 98 View
4002647 chr17 24 53 8 85 View
4004155 chr17 43 5 48 View
4004329 chr17 43 3 46 View
4005620 chr17 3 28 31 View
4005858 chr17 21 8 29 View
4007511 chr17 17 1 1 19 View
4007614 chr17 5 13 18 View
4008155 chr17 10 6 16 View
4008488 chr17 11 4 15 View
4008771 chr17 14 14 View
4009145 chr17 12 12 View
4010570 chr17 1 7 8 View
4011961 chr17 4 2 6 View
4012261 chr17 4 1 5 View
4300015 chr17 9 16 104 129 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of RNF157 expression and immune infiltrating cell level correlation result in HIV+ samples
RNF157 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of RNF157 expression and immune infiltrating cell level correlation result in HIV+ samples
RNF157 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).