HTLV1 Target gene Detail Information

> RNF144A Gene Search Result

Gene Information

Gene Name	RNF144A
Gene ID	9781
Gene Full Name	ring finger protein 144A
Gene Alias	hUIP4; RNF144; UBCE7IP4
Transcripts	ENSG00000151692
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Vesicles;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Gene Function	Suppressor gene
Uniport_ID	P50876
HGNC ID	HGNC:20457
VEGA ID	OTTHUMG00000090353
String ID	9606.ENSP00000321330
PharmGKB ID	PA162401542

Target gene [RNF144A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6011614	chr2	16	10		26	View
6019000	chr2	6	2		8	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of RNF144A expression and immune infiltrating cell level correlation result in HTLV1+ samples
RNF144A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).