HIV Target gene Detail Information

> RNF111 Gene Search Result

Gene Information

Gene Name	RNF111
Gene ID	54778
Gene Full Name	ring finger protein 111
Gene Alias	ARK; hRNF111
Transcripts	ENSG00000157450
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	Q6ZNA4
HGNC ID	HGNC:17384
VEGA ID	OTTHUMG00000132716
OMIM ID	605840
String ID	9606.ENSP00000453872
PharmGKB ID	PA134868772

Target gene [RNF111] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4003864	chr15	37	16		53	View
4004085	chr15	33	15	1	49	View
4006740	chr15	22	1		23	View
4007022	chr15	19	2		21	View
4011948	chr15	6			6	View
4100053	chr15	4	115	6	125	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RNF111 expression and immune infiltrating cell level correlation result in HIV+ samples
RNF111 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).