HIV Target gene Detail Information

> RMI2 Gene Search Result

Gene Information

Gene Name	RMI2
Gene ID	116028
Gene Full Name	RecQ mediated genome instability 2
Gene Alias	BLAP18; C16orf75
Transcripts	ENSG00000175643
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Cytosol;
HPA Protein Class Info	Cancer-related genes, Disease related genes, Predicted intracellular proteins
Uniport_ID	Q96E14
HGNC ID	HGNC:28349
VEGA ID	OTTHUMG00000129793
OMIM ID	612426
String ID	9606.ENSP00000310356
PharmGKB ID	PA145149635

Target gene [RMI2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000309	chr16	93	94	370	557	View
4000489	chr16	133	131	165	429	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RMI2 expression and immune infiltrating cell level correlation result in HIV+ samples
RMI2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).