HIV Target gene Detail Information

> RMDN1 Gene Search Result

Gene Information

Gene Name	RMDN1
Gene ID	51115
Gene Full Name	regulator of microtubule dynamics 1
Gene Alias	RMD1; RMD-1; CGI-90; FAM82B
Transcripts	ENSG00000176623
Virus	HIV
Gene Type	protein coding
HPA Location Info	Centrosome;Actin filaments;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q96DB5
HGNC ID	HGNC:24285
VEGA ID	OTTHUMG00000163692
OMIM ID	611871
String ID	9606.ENSP00000385927
PharmGKB ID	PA142671849

Target gene [RMDN1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4014550	chr8	2			2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RMDN1 expression and immune infiltrating cell level correlation result in HIV+ samples
RMDN1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).