HIV Target gene Detail Information

> RIMS3 Gene Search Result

Gene Information

Gene Name	RIMS3
Gene ID	9783
Gene Full Name	regulating synaptic membrane exocytosis 3
Gene Alias	NIM3; RIM3; RIM 3
Transcripts	ENSG00000117016
Virus	HIV
Gene Type	protein coding
HPA Location Info	Mitochondria;Nucleoli;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9UJD0
HGNC ID	HGNC:21292
VEGA ID	OTTHUMG00000007453
OMIM ID	611600
String ID	9606.ENSP00000361769
PharmGKB ID	PA134980870

Target gene [RIMS3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4005656	chr1	15	10	5	30	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RIMS3 expression and immune infiltrating cell level correlation result in HIV+ samples
RIMS3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).