HBV Target gene Detail Information

> RIMS1 Gene Search Result

Gene Information

Gene Name	RIMS1
Gene ID	22999
Gene Full Name	regulating synaptic membrane exocytosis 1
Gene Alias	RIM; RIM1; CORD7; RAB3IP2
Transcripts	ENSG00000079841
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q86UR5
HGNC ID	HGNC:17282
VEGA ID	OTTHUMG00000015009
OMIM ID	606629
String ID	9606.ENSP00000428417
PharmGKB ID	PA38220

Target gene [RIMS1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1006882	chr6	32	1		33	View
1012296	chr6	5	2		7	View
1017458	chr6	1			1	View
1018475	chr6				0	View
1018476	chr6				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RIMS1 expression and immune infiltrating cell level correlation result in HBV+ samples
RIMS1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).