HIV Target gene Detail Information

> RIMKLB Gene Search Result

Gene Information

Gene Name	RIMKLB
Gene ID	57494
Gene Full Name	ribosomal modification protein rimK like family member B
Gene Alias	NAAGS; FAM80B; NAAGS-I
Transcripts	ENSG00000166532
Virus	HIV
Gene Type	protein coding
HPA Location Info	Centriolar satellite;Nucleoplasm;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q9ULI2
HGNC ID	HGNC:29228
VEGA ID	OTTHUMG00000168197
OMIM ID	614054
String ID	9606.ENSP00000350136
PharmGKB ID	PA164725354

Target gene [RIMKLB] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002453	chr12	42	38	14	94	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RIMKLB expression and immune infiltrating cell level correlation result in HIV+ samples
RIMKLB expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RIMKLB expression and immune infiltrating cell level correlation result in HIV+ samples
RIMKLB expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).