HPV Target gene Detail Information

> RHD Gene Search Result

Gene Information

Gene Name	RHD
Gene ID	6007
Gene Full Name	Rh blood group D antigen
Gene Alias	RH; Rh4; RH30; RhII; RhPI; DIIIc; RHCED; RHDel; RHPII; RhDCw; CD240D; RHXIII; RHDVA(TT); RhK562-II
Transcripts	ENSG00000187010
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Blood group antigen proteins, CD markers, Predicted membrane proteins, Transporters
Uniport_ID	Q02161
HGNC ID	HGNC:10009
VEGA ID	OTTHUMG00000003476
OMIM ID	111680
String ID	9606.ENSP00000339577
Drugbank ID	BE0002389
PharmGKB ID	PA34387

Target gene [RHD] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5401762	chr1	3	1		4	View
5401763	chr1	1			1	View
5401771	chr1	9	71	13	93	View
5401772	chr1	3	1		4	View
5401836	chr1	9	81	19	109	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
HNSC (TCGA)	Head and Neck squamous cell carcinoma	566	Head and Neck squamous cell carcinoma(HPV-)(483),Head and Neck squamous cell carcinoma(HPV+)(39),Paracancerous(HPV-)(44)

> Dataset: HNSC
HeatMap of cell type fractions in all samples	Lollipop of RHD expression and immune infiltrating cell level correlation result in HPV+ samples
RHD expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).