HBV Target gene Detail Information

> RHBG Gene Search Result


Gene Information
Gene Name RHBG
Gene ID 57127
Gene Full Name Rh family B glycoprotein (gene/pseudogene)
Gene Alias SLC42A2
Transcripts ENSG00000132677
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID Q9H310
HGNC ID HGNC:14572
VEGA ID OTTHUMG00000024057
OMIM ID 607079
String ID 9606.ENSP00000441197
PharmGKB ID PA34385
Target gene [RHBG] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1015153 chr1 2 1 3 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of RHBG expression and immune infiltrating cell level correlation result in HBV+ samples
RHBG expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).