HPV Target gene Detail Information

> RGPD2 Gene Search Result

Gene Information

Gene Name	RGPD2
Gene ID	729857
Gene Full Name	RANBP2-like and GRIP domain containing 2
Gene Alias	RGP2; NUP358; RANBP2L2
Transcripts	ENSG00000185304
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nuclear membrane;Vesicles;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P0DJD1
HGNC ID	HGNC:32415
VEGA ID	OTTHUMG00000153276
OMIM ID	612705
String ID	9606.ENSP00000381214
PharmGKB ID	PA142671071

Target gene [RGPD2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5400089	chr2				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE138080 (GEO)	Cervical intraepithelial neoplasia	25	Normal (10), Cervical intraepithelial neoplasia (HPV+)(15)

> Dataset: GSE138080
HeatMap of cell type fractions in all samples	Lollipop of RGPD2 expression and immune infiltrating cell level correlation result in HPV+ samples
RGPD2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).