HBV Target gene Detail Information

> RFX2 Gene Search Result

Gene Information

Gene Name	RFX2
Gene ID	5990
Gene Full Name	regulatory factor X2
Transcripts	ENSG00000087903
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Golgi apparatus;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins, Transcription factors
Uniport_ID	P48378
HGNC ID	HGNC:9983
VEGA ID	OTTHUMG00000180711
OMIM ID	142765
String ID	9606.ENSP00000306335
PharmGKB ID	PA34353

Target gene [RFX2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1000469	chr19	1133	689	310	2132	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RFX2 expression and immune infiltrating cell level correlation result in HBV+ samples
RFX2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).