HBV Target gene Detail Information

> RFTN1 Gene Search Result

Gene Information

Gene Name	RFTN1
Gene ID	23180
Gene Full Name	raftlin, lipid raft linker 1
Gene Alias	MIG2; PIG9; PIB10; RAFTLIN
Transcripts	ENSG00000131378
Virus	HBV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q14699
HGNC ID	HGNC:30278
VEGA ID	OTTHUMG00000156973
OMIM ID	618210
String ID	9606.ENSP00000334153
PharmGKB ID	PA162401206

Target gene [RFTN1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1002544	chr3	15	76	160	251	View
1004559	chr3	53	15	9	77	View
1004585	chr3	53	14	9	76	View
1010143	chr3	11	2		13	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RFTN1 expression and immune infiltrating cell level correlation result in HBV+ samples
RFTN1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).