HIV Target gene Detail Information

> RETREG1 Gene Search Result


Gene Information
Gene Name RETREG1
Gene ID 54463
Gene Full Name reticulophagy regulator 1
Gene Alias JK1; JK-1; FAM134B
Transcripts ENSG00000154153
Virus HIV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Disease related genes, Predicted membrane proteins
Uniport_ID Q9H6L5
HGNC ID HGNC:25964
OMIM ID 613114
PharmGKB ID PA162386188
Target gene [RETREG1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4011261 chr5 1 6 7 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).