HBV Target gene Detail Information

> RELL1 Gene Search Result


Gene Information
Gene Name RELL1
Gene ID 768211
Gene Full Name RELT like 1
Transcripts ENSG00000181826
Virus HBV
Gene Type protein coding
HPA Location Info Microtubules;Plasma membrane;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q8IUW5
HGNC ID HGNC:27379
VEGA ID OTTHUMG00000160389
OMIM ID 611212
String ID 9606.ENSP00000398778
PharmGKB ID PA162401054
Target gene [RELL1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004152 chr4 16 14 61 91 View
1004298 chr4 20 11 55 86 View
1006517 chr4 29 6 35 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of RELL1 expression and immune infiltrating cell level correlation result in HBV+ samples
RELL1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).