HIV Target gene Detail Information

> RCHY1 Gene Search Result

Gene Information

Gene Name	RCHY1
Gene ID	25898
Gene Full Name	ring finger and CHY zinc finger domain containing 1
Gene Alias	ZCHY; ARNIP; CHIMP; PIRH2; RNF199; ZNF363; PRO1996
Transcripts	ENSG00000163743
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;Vesicles;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	Q96PM5
HGNC ID	HGNC:17479
VEGA ID	OTTHUMG00000130105
OMIM ID	607680
String ID	9606.ENSP00000321239
PharmGKB ID	PA38240

Target gene [RCHY1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4010875	chr4	6		2	8	View
4012495	chr4	4		1	5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RCHY1 expression and immune infiltrating cell level correlation result in HIV+ samples
RCHY1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RCHY1 expression and immune infiltrating cell level correlation result in HIV+ samples
RCHY1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).