HIV Target gene Detail Information

> RBPJ Gene Search Result


Gene Information
Gene Name RBPJ
Gene ID 3516
Gene Full Name recombination signal binding protein for immunoglobulin kappa J region
Gene Alias SUH; csl; AOS3; CBF1; KBF2; RBP-J; RBPJK; IGKJRB; RBPSUH; IGKJRB1
Transcripts ENSG00000168214
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID Q06330
HGNC ID HGNC:5724
VEGA ID OTTHUMG00000097793
OMIM ID 147183
String ID 9606.ENSP00000345206
PharmGKB ID PA34292
Target gene [RBPJ] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001240 chr4 81 9 99 189 View
4007863 chr4 17 17 View
4010327 chr4 8 1 9 View
4012160 chr4 5 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).