HBV Target gene Detail Information

> RBP7 Gene Search Result


Gene Information
Gene Name RBP7
Gene ID 116362
Gene Full Name retinol binding protein 7
Gene Alias CRBP4; CRABP4; CRBPIV
Transcripts ENSG00000162444
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Nuclear speckles;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96R05
HGNC ID HGNC:30316
VEGA ID OTTHUMG00000001798
OMIM ID 608604
String ID 9606.ENSP00000294435
Drugbank ID BE0000532
PharmGKB ID PA134988307
Target gene [RBP7] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001847 chr1 82 121 252 455 View
1001873 chr1 76 115 250 441 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of RBP7 expression and immune infiltrating cell level correlation result in HBV+ samples
RBP7 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).