HIV Target gene Detail Information

> RBMS2 Gene Search Result

Gene Information

Gene Name	RBMS2
Gene ID	5939
Gene Full Name	RNA binding motif single stranded interacting protein 2
Gene Alias	SCR3
Transcripts	ENSG00000076067
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli fibrillar center;Cytosol;Nucleoplasm;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q15434
HGNC ID	HGNC:9909
VEGA ID	OTTHUMG00000170488
OMIM ID	602387
String ID	9606.ENSP00000262031
PharmGKB ID	PA34275

Target gene [RBMS2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002367	chr12	74	13	10	97	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RBMS2 expression and immune infiltrating cell level correlation result in HIV+ samples
RBMS2 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RBMS2 expression and immune infiltrating cell level correlation result in HIV+ samples
RBMS2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).