HTLV1 Target gene Detail Information

> RBMS1 Gene Search Result


Gene Information
Gene Name RBMS1
Gene ID 5937
Gene Full Name RNA binding motif single stranded interacting protein 1
Gene Alias YC1; MSSP; SCR2; HCC-4; MSSP-1; MSSP-2; MSSP-3; C2orf12
Transcripts ENSG00000153250
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P29558
HGNC ID HGNC:9907
VEGA ID OTTHUMG00000132031
OMIM ID 602310
String ID 9606.ENSP00000294904
PharmGKB ID PA34273
Target gene [RBMS1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001423 chr2 54 46 344 444 View
6005421 chr2 25 3 60 88 View
6007383 chr2 54 2 56 View
6010225 chr2 16 8 8 32 View
6030257 chr2 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).