HBV Target gene Detail Information

> RBM47 Gene Search Result

Gene Information

Gene Name	RBM47
Gene ID	54502
Gene Full Name	RNA binding motif protein 47
Gene Alias	NET18
Transcripts	ENSG00000163694
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Nucleoplasm;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	A0AV96
HGNC ID	HGNC:30358
VEGA ID	OTTHUMG00000128598
OMIM ID	619104
String ID	9606.ENSP00000371212
PharmGKB ID	PA162400825

Target gene [RBM47] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1010581	chr4	10	1		11	View
1011830	chr4	5	3		8	View
1011831	chr4	5	3		8	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RBM47 expression and immune infiltrating cell level correlation result in HBV+ samples
RBM47 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).