HIV Target gene Detail Information

> RBM39 Gene Search Result


Gene Information
Gene Name RBM39
Gene ID 9584
Gene Full Name RNA binding motif protein 39
Gene Alias HCC1; CAPER; RNPC2; FSAP59; CAPERalpha
Transcripts ENSG00000131051
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear speckles;Nucleoplasm;Centriolar satellite;Microtubules;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q14498
HGNC ID HGNC:15923
VEGA ID OTTHUMG00000032358
OMIM ID 604739
String ID 9606.ENSP00000253363
PharmGKB ID PA34450
Target gene [RBM39] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002862 chr20 71 6 77 View
4005711 chr20 4 19 7 30 View
4007410 chr20 4 12 3 19 View
4008823 chr20 7 7 14 View
4009058 chr20 2 8 3 13 View
4009411 chr20 10 1 11 View
4011845 chr20 3 3 6 View
4013806 chr20 3 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).