HIV Target gene Detail Information

> RBM26 Gene Search Result

Gene Information

Gene Name	RBM26
Gene ID	64062
Gene Full Name	RNA binding motif protein 26
Gene Alias	ARRS2; SE70-2; ZC3H17; PRO1777; C13orf10; PPP1R132
Transcripts	ENSG00000139746
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q5T8P6
HGNC ID	HGNC:20327
VEGA ID	OTTHUMG00000017133
String ID	9606.ENSP00000483408
PharmGKB ID	PA134982324

Target gene [RBM26] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4008142	chr13	2	13	1	16	View
4011045	chr13	6	1		7	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RBM26 expression and immune infiltrating cell level correlation result in HIV+ samples
RBM26 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RBM26 expression and immune infiltrating cell level correlation result in HIV+ samples
RBM26 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).