HIV Target gene Detail Information

> RBFOX2 Gene Search Result

Gene Information

Gene Name	RBFOX2
Gene ID	23543
Gene Full Name	RNA binding fox-1 homolog 2
Gene Alias	RTA; fxh; FOX2; RBM9; Fox-2; HNRBP2; HRNBP2; dJ106I20.3
Transcripts	ENSG00000277564
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	O43251
HGNC ID	HGNC:9906
VEGA ID	OTTHUMG00000189894
OMIM ID	612149
String ID	9606.ENSP00000413035
PharmGKB ID	PA34272

Target gene [RBFOX2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4016309	chr22				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RBFOX2 expression and immune infiltrating cell level correlation result in HIV+ samples
RBFOX2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).