HTLV1 Target gene Detail Information

> RBFOX1 Gene Search Result

Gene Information

Gene Name	RBFOX1
Gene ID	54715
Gene Full Name	RNA binding fox-1 homolog 1
Gene Alias	2BP1; FOX1; A2BP1; FOX-1; HRNBP1
Transcripts	ENSG00000078328
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;Golgi apparatus;Nucleoli fibrillar center;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9NWB1
HGNC ID	HGNC:18222
VEGA ID	OTTHUMG00000129551
OMIM ID	605104
String ID	9606.ENSP00000309117
PharmGKB ID	PA166048951

Target gene [RBFOX1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6006026	chr16	27	10	39	76	View
6009562	chr16	33	3		36	View
6010947	chr16	27	1		28	View
6010982	chr16	3	21	4	28	View
6015816	chr16	10	3		13	View
6016675	chr16	8	4		12	View
6016891	chr16		4	7	11	View
6018300	chr16	9			9	View
6018514	chr16		1	8	9	View
6020533	chr16	5	2		7	View
6021155	chr16	6			6	View
6022442	chr16	5			5	View
6024157	chr16	2		2	4	View
6024635	chr16	3			3	View
6024762	chr16		1	2	3	View
6025095	chr16	1	2		3	View
6027059	chr16	1	1		2	View
6027224	chr16	2			2	View
6028062	chr16	1			1	View
6029064	chr16	1			1	View
6029219	chr16	1			1	View
6029220	chr16	1			1	View
6031145	chr16				0	View
6031588	chr16				0	View
6031593	chr16				0	View
6032623	chr16				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).