HPV Target gene Detail Information

> RBFOX1 Gene Search Result

Gene Information

Gene Name	RBFOX1
Gene ID	54715
Gene Full Name	RNA binding fox-1 homolog 1
Gene Alias	2BP1; FOX1; A2BP1; FOX-1; HRNBP1
Transcripts	ENSG00000078328
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;Golgi apparatus;Nucleoli fibrillar center;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q9NWB1
HGNC ID	HGNC:18222
VEGA ID	OTTHUMG00000129551
OMIM ID	605104
String ID	9606.ENSP00000309117
PharmGKB ID	PA166048951

Target gene [RBFOX1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5001538	chr16	12	3	14	29	View
5002836	chr16	5	2		7	View
5003546	chr16	3			3	View
5004371	chr16				0	View
5201028	chr16	17	8	2	27	View
5300159	chr16	17	22	1	40	View
5300160	chr16	2	5		7	View
5402361	chr16		1		1	View
5402418	chr16	27	10	4	41	View
5403054	chr16	5	3	3	11	View
5403800	chr16	4	2		6	View
5404031	chr16	1			1	View
5404077	chr16	4	6		10	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).