HBV Target gene Detail Information

> RASSF8 Gene Search Result


Gene Information
Gene Name RASSF8
Gene ID 11228
Gene Full Name Ras association domain family member 8
Gene Alias HOJ1; C12orf2
Transcripts ENSG00000123094
Virus HBV
Gene Type protein coding
HPA Location Info Cytosol;Mitochondria;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins
Gene Function Suppressor gene
Uniport_ID Q8NHQ8
HGNC ID HGNC:13232
VEGA ID OTTHUMG00000169087
OMIM ID 608231
String ID 9606.ENSP00000384491
PharmGKB ID PA25502
Target gene [RASSF8] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005399 chr12 27 26 2 55 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of RASSF8 expression and immune infiltrating cell level correlation result in HBV+ samples
RASSF8 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).