HIV Target gene Detail Information

> RARG Gene Search Result

Gene Information

Gene Name	RARG
Gene ID	5916
Gene Full Name	retinoic acid receptor gamma
Gene Alias	RARC; NR1B3
Transcripts	ENSG00000172819
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;
HPA Protein Class Info	Cancer-related genes, FDA approved drug targets, Nuclear receptors, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID	P13631
HGNC ID	HGNC:9866
VEGA ID	OTTHUMG00000048077
OMIM ID	180190
String ID	9606.ENSP00000388510
Drugbank ID	BE0000144
PharmGKB ID	PA34227

Target gene [RARG] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007345	chr12	4	13	3	20	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RARG expression and immune infiltrating cell level correlation result in HIV+ samples
RARG expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).