HTLV1 Target gene Detail Information

> RAPGEF6 Gene Search Result

Gene Information

Gene Name	RAPGEF6
Gene ID	51735
Gene Full Name	Rap guanine nucleotide exchange factor 6
Gene Alias	RAGEF2; PDZGEF2; KIA001LB; PDZ-GEF2; RA-GEF-2
Transcripts	ENSG00000158987
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;Centrosome;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8TEU7
HGNC ID	HGNC:20655
VEGA ID	OTTHUMG00000162683
OMIM ID	610499
String ID	9606.ENSP00000296859
PharmGKB ID	PA134885793

Target gene [RAPGEF6] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6007721	chr5	50	2		52	View
6008958	chr5	36	4	1	41	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).