HIV Target gene Detail Information

> RAPGEF6 Gene Search Result


Gene Information
Gene Name RAPGEF6
Gene ID 51735
Gene Full Name Rap guanine nucleotide exchange factor 6
Gene Alias RAGEF2; PDZGEF2; KIA001LB; PDZ-GEF2; RA-GEF-2
Transcripts ENSG00000158987
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Centrosome;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8TEU7
HGNC ID HGNC:20655
VEGA ID OTTHUMG00000162683
OMIM ID 610499
String ID 9606.ENSP00000296859
PharmGKB ID PA134885793
Target gene [RAPGEF6] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000656 chr5 305 16 9 330 View
4000717 chr5 54 62 190 306 View
4001229 chr5 96 51 44 191 View
4001594 chr5 139 9 148 View
4006958 chr5 7 11 4 22 View
4011503 chr5 5 1 6 View
4011621 chr5 4 1 1 6 View
4014503 chr5 2 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).