HIV Target gene Detail Information

> RAPGEF1 Gene Search Result

Gene Information

Gene Name	RAPGEF1
Gene ID	2889
Gene Full Name	Rap guanine nucleotide exchange factor 1
Gene Alias	C3G; GRF2
Transcripts	ENSG00000107263
Virus	HIV
Gene Type	protein coding
HPA Location Info	Vesicles;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q13905
HGNC ID	HGNC:4568
VEGA ID	OTTHUMG00000020829
OMIM ID	600303
String ID	9606.ENSP00000361263
PharmGKB ID	PA28964

Target gene [RAPGEF1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000177	chr9	339	149	330	818	View
4000215	chr9	298	237	175	710	View
4002854	chr9	69	3	5	77	View
4004335	chr9	43	3		46	View
4004750	chr9	15	23	2	40	View
4006426	chr9	15	5	5	25	View
4007749	chr9	15	3		18	View
4008103	chr9	9	5	2	16	View
4012372	chr9	2	2	1	5	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).