HIV Target gene Detail Information

> RAP1GAP2 Gene Search Result

Gene Information

Gene Name	RAP1GAP2
Gene ID	23108
Gene Full Name	RAP1 GTPase activating protein 2
Gene Alias	GARNL4; RAP1GA3
Transcripts	ENSG00000132359
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Nuclear membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q684P5
HGNC ID	HGNC:29176
VEGA ID	OTTHUMG00000177642
OMIM ID	618714
String ID	9606.ENSP00000254695
PharmGKB ID	PA165432528

Target gene [RAP1GAP2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4011061	chr17	7			7	View
4014397	chr17	1		1	2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RAP1GAP2 expression and immune infiltrating cell level correlation result in HIV+ samples
RAP1GAP2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).