HIV Target gene Detail Information

> RANGAP1 Gene Search Result

Gene Information

Gene Name	RANGAP1
Gene ID	5905
Gene Full Name	Ran GTPase activating protein 1
Gene Alias	SD; Fug1; RANGAP
Transcripts	ENSG00000100401
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear membrane;Cytosol;Vesicles;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID	P46060
HGNC ID	HGNC:9854
VEGA ID	OTTHUMG00000150940
OMIM ID	602362
String ID	9606.ENSP00000401470
PharmGKB ID	PA34216

Target gene [RANGAP1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007002	chr22	20	1		21	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RANGAP1 expression and immune infiltrating cell level correlation result in HIV+ samples
RANGAP1 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RANGAP1 expression and immune infiltrating cell level correlation result in HIV+ samples
RANGAP1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).