HIV Target gene Detail Information

> RANBP9 Gene Search Result

Gene Information

Gene Name	RANBP9
Gene ID	10048
Gene Full Name	RAN binding protein 9
Gene Alias	BPM-L; BPM90; RANBPM; RanBP7
Transcripts	ENSG00000010017
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;
HPA Protein Class Info	Predicted intracellular proteins
Gene Function	Suppressor gene
Uniport_ID	Q96S59
HGNC ID	HGNC:13727
VEGA ID	OTTHUMG00000015642
OMIM ID	603854
String ID	9606.ENSP00000011619
PharmGKB ID	PA34215

Target gene [RANBP9] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002231	chr6	93	9	2	104	View
4004899	chr6	38			38	View
4004983	chr6	37			37	View
4008711	chr6	4	10		14	View
4010756	chr6	4	1	3	8	View
4012337	chr6	3	1	1	5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RANBP9 expression and immune infiltrating cell level correlation result in HIV+ samples
RANBP9 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RANBP9 expression and immune infiltrating cell level correlation result in HIV+ samples
RANBP9 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).