HIV Target gene Detail Information

> RAD54B Gene Search Result

Gene Information

Gene Name	RAD54B
Gene ID	25788
Gene Full Name	RAD54 homolog B
Gene Alias	RDH54
Transcripts	ENSG00000197275
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9Y620
HGNC ID	HGNC:17228
VEGA ID	OTTHUMG00000133658
OMIM ID	604289
String ID	9606.ENSP00000336606
PharmGKB ID	PA134927202

Target gene [RAD54B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4016047	chr8				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RAD54B expression and immune infiltrating cell level correlation result in HIV+ samples
RAD54B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).