HIV Target gene Detail Information

> RAD54B Gene Search Result


Gene Information
Gene Name RAD54B
Gene ID 25788
Gene Full Name RAD54 homolog B
Gene Alias RDH54
Transcripts ENSG00000197275
Virus HIV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Cancer-related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9Y620
HGNC ID HGNC:17228
VEGA ID OTTHUMG00000133658
OMIM ID 604289
String ID 9606.ENSP00000336606
PharmGKB ID PA134927202
Target gene [RAD54B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4016047 chr8 0 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of RAD54B expression and immune infiltrating cell level correlation result in HIV+ samples
RAD54B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).