HBV Target gene Detail Information

> RABL3 Gene Search Result


Gene Information
Gene Name RABL3
Gene ID 285282
Gene Full Name RAB, member of RAS oncogene family like 3
Transcripts ENSG00000144840
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5HYI8
HGNC ID HGNC:18072
VEGA ID OTTHUMG00000159668
OMIM ID 618542
String ID 9606.ENSP00000273375
PharmGKB ID PA34161
Target gene [RABL3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001154 chr3 537 152 298 987 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of RABL3 expression and immune infiltrating cell level correlation result in HBV+ samples
RABL3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).