HTLV1 Target gene Detail Information

> RABGEF1 Gene Search Result


Gene Information
Gene Name RABGEF1
Gene ID 27342
Gene Full Name RAB guanine nucleotide exchange factor 1
Gene Alias RAP1; RABEX5; rabex-5
Transcripts ENSG00000154710
Virus HTLV1
Gene Type protein coding
HPA Location Info Cytosol;Nucleoli;
HPA Protein Class Info Predicted intracellular proteins, Transporters
Uniport_ID Q9UJ41
HGNC ID HGNC:17676
VEGA ID OTTHUMG00000129547
OMIM ID 609700
String ID 9606.ENSP00000370208
PharmGKB ID PA134946532
Target gene [RABGEF1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010216 chr7 25 7 32 View
6015475 chr7 11 3 14 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).