HIV Target gene Detail Information

> RAB3B Gene Search Result

Gene Information

Gene Name	RAB3B
Gene ID	5865
Gene Full Name	RAB3B, member RAS oncogene family
Transcripts	ENSG00000169213
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cell Junctions;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P20337
HGNC ID	HGNC:9778
VEGA ID	OTTHUMG00000008627
OMIM ID	179510
String ID	9606.ENSP00000360718
PharmGKB ID	PA34133

Target gene [RAB3B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006063	chr1	21		6	27	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RAB3B expression and immune infiltrating cell level correlation result in HIV+ samples
RAB3B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).