HBV Target gene Detail Information

> RAB38 Gene Search Result

Gene Information

Gene Name	RAB38
Gene ID	23682
Gene Full Name	RAB38, member RAS oncogene family
Gene Alias	rrGTPbp; NY-MEL-1
Transcripts	ENSG00000123892
Virus	HBV
Gene Type	protein coding
HPA Location Info	Mitochondria;Nuclear bodies;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	P57729
HGNC ID	HGNC:9776
VEGA ID	OTTHUMG00000167288
OMIM ID	606281
String ID	9606.ENSP00000243662
PharmGKB ID	PA34129

Target gene [RAB38] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1014423	chr11	2	1		3	View
1015253	chr11	1	1		2	View
1017259	chr11	1			1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RAB38 expression and immune infiltrating cell level correlation result in HBV+ samples
RAB38 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).