HIV Target gene Detail Information

> RAB27B Gene Search Result

Gene Information

Gene Name	RAB27B
Gene ID	5874
Gene Full Name	RAB27B, member RAS oncogene family
Gene Alias	C25KG
Transcripts	ENSG00000041353
Virus	HIV
Gene Type	protein coding
HPA Location Info	Golgi apparatus;Plasma membrane;Cytosol;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	O00194
HGNC ID	HGNC:9767
VEGA ID	OTTHUMG00000132710
OMIM ID	603869
String ID	9606.ENSP00000262094
PharmGKB ID	PA34118

Target gene [RAB27B] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002242	chr18	82	18	3	103	View
4016618	chr18				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RAB27B expression and immune infiltrating cell level correlation result in HIV+ samples
RAB27B expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).