HIV Target gene Detail Information

> RAB22A Gene Search Result

Gene Information

Gene Name	RAB22A
Gene ID	57403
Gene Full Name	RAB22A, member RAS oncogene family
Transcripts	ENSG00000124209
Virus	HIV
Gene Type	protein coding
HPA Location Info	Centrosome;
HPA Protein Class Info	Predicted intracellular proteins
Gene Function	Oncogene
Uniport_ID	Q9UL26
HGNC ID	HGNC:9764
VEGA ID	OTTHUMG00000032844
OMIM ID	612966
String ID	9606.ENSP00000244040
PharmGKB ID	PA34112

Target gene [RAB22A] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4001096	chr20	28	106	82	216	View
4016763	chr20				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RAB22A expression and immune infiltrating cell level correlation result in HIV+ samples
RAB22A expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RAB22A expression and immune infiltrating cell level correlation result in HIV+ samples
RAB22A expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).